ComplexHeatmap
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Download Gene List
Download Datatable
The gene list on the row
PDF options
Choose height and width for heatmap
Graph heigh value
Graph width value
Download Heatmap
The parameter for pheatmap
Expression To Color Option
Please choose the color set
Color palettes
BrBG
PiYG
PRGn
PuOr
RdBu
RdGy
RdYlBu
RdYlGn
Spectral
Color of cell borders
NA
black
white
green
blue
purple
red
orange
yellow
Center scale values
row
column
none
Annotation Color Option
Double click to start editing.
Hit Ctrl+Enter to finished editing, or Esc to cancel.
Heatmap Name
Please choose the name option for pheatmap
Legend or not
TRUE
FALSE
Legend Name
Row Relative Option
Choose row options for pheatmap
Cluster row or not
TRUE
FALSE
Distance to cluster
euclidean
maximum
manhattan
canberra
binary
minkowski
Show rownames
TRUE
FALSE
Font size for rowname
column Relative Option
Choose column options for pheatmap
Cluster column or not
TRUE
FALSE
Distance to cluster
euclidean
maximum
manhattan
canberra
binary
minkowski
Show colnames
TRUE
FALSE
Font size for colname
Double click to start editing the column order.
Hit Ctrl+Enter to finished editing, or Esc to cancel.
Cluster Relative Option
Choose distance and algorithm to cluster
Select algorithm to cluster
complete
single
average
centroid
median
The gene list on the row
Download
Choose height and width for heatmap
Graph heigh value
Graph width value
Select the graph type
png
pdf
Download Gene List
Download Heatmap
The parameter for complex heatmap
Expression To Color Option
The left is expression value, the right is color
Low Value
Low color
green
blue
purple
red
orange
yellow
white
High Value
High color
red
orange
yellow
green
blue
purple
white
Annotation Color Option
Double click to start editing.
Hit Ctrl+Enter to finished editing, or Esc to cancel.
Heatmap Name
Please choose the name option for heatmap
Legend or not
TRUE
FALSE
Legend Name
Row Relative Option
Choose orientation for row name and the height for dend
Orientation for row name
right
left
none
Select height for row dend
Font size for rowname
column Relative Option
Choose orientation for column name and the height for dend
Select orientation for column name
bottom
top
none
Select height for column dend
Cluster Relative Option
Choose distance and algorithm to cluster
Select distance to cluster
euclidean
maximum
manhattan
canberra
binary
minkowski
Select algorithm to cluster
complete
single
average
centroid
median